.. AUTO-GENERATED FILE -- DO NOT EDIT! :mod:`data` =========== .. automodule:: dipy.data .. currentmodule:: dipy.data .. autosummary:: DataError GradientTable HemiSphere Sphere as_native_array dirname dsi_deconv_voxels dsi_voxels fetch_bundle_atlas_hcp842 fetch_bundle_fa_hcp fetch_bundles_2_subjects fetch_cenir_multib fetch_cfin_multib fetch_gold_standard_io fetch_isbi2013_2shell fetch_ivim fetch_mni_template fetch_scil_b0 fetch_sherbrooke_3shell fetch_stanford_hardi fetch_stanford_labels fetch_stanford_pve_maps fetch_stanford_t1 fetch_syn_data fetch_taiwan_ntu_dsi fetch_target_tractogram_hcp fetch_tissue_data get_3shell_gtab get_bundle_atlas_hcp842 get_cmap get_fnames get_gtab_taiwan_dsi get_isbi2013_2shell_gtab get_sim_voxels get_skeleton get_sphere get_target_tractogram_hcp gradient_table load loads_compat matlab_life_results mrtrix_spherical_functions pjoin read_bundles_2_subjects read_cenir_multib read_cfin_dwi read_cfin_t1 read_isbi2013_2shell read_ivim read_mni_template read_scil_b0 read_sherbrooke_3shell read_stanford_hardi read_stanford_labels read_stanford_pve_maps read_stanford_t1 read_syn_data read_taiwan_ntu_dsi read_tissue_data relist_streamlines sticks_and_ball two_cingulum_bundles .. AUTO-GENERATED FILE -- DO NOT EDIT! Module: :mod:`data.fetcher` --------------------------- .. automodule:: dipy.data.fetcher .. currentmodule:: dipy.data.fetcher .. autosummary:: FetcherError check_md5 copyfileobj copyfileobj_withprogress fetch_bundle_atlas_hcp842 fetch_bundle_fa_hcp fetch_bundles_2_subjects fetch_cenir_multib fetch_cfin_multib fetch_data fetch_file_formats fetch_gold_standard_io fetch_isbi2013_2shell fetch_ivim fetch_mni_template fetch_qtdMRI_test_retest_2subjects fetch_scil_b0 fetch_sherbrooke_3shell fetch_stanford_hardi fetch_stanford_labels fetch_stanford_pve_maps fetch_stanford_t1 fetch_syn_data fetch_taiwan_ntu_dsi fetch_target_tractogram_hcp fetch_tissue_data get_bundle_atlas_hcp842 get_file_formats get_target_tractogram_hcp get_two_hcp842_bundles gradient_table gradient_table_from_gradient_strength_bvecs md5 pjoin read_bundles_2_subjects read_bvals_bvecs read_cenir_multib read_cfin_dwi read_cfin_t1 read_isbi2013_2shell read_ivim read_mni_template read_qtdMRI_test_retest_2subjects read_scil_b0 read_sherbrooke_3shell read_siemens_scil_b0 read_stanford_hardi read_stanford_labels read_stanford_pve_maps read_stanford_t1 read_syn_data read_taiwan_ntu_dsi read_tissue_data update_progressbar urlopen .. currentmodule:: dipy.data :class:`DataError` ~~~~~~~~~~~~~~~~~~ .. autoclass:: DataError :members: :undoc-members: :show-inheritance: .. automethod:: __init__ :class:`GradientTable` ~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: GradientTable :members: :undoc-members: :show-inheritance: .. automethod:: __init__ :class:`HemiSphere` ~~~~~~~~~~~~~~~~~~~ .. autoclass:: HemiSphere :members: :undoc-members: :show-inheritance: .. automethod:: __init__ :class:`Sphere` ~~~~~~~~~~~~~~~ .. autoclass:: Sphere :members: :undoc-members: :show-inheritance: .. automethod:: __init__ as_native_array ~~~~~~~~~~~~~~~ .. autofunction:: as_native_array dirname ~~~~~~~ .. autofunction:: dirname dsi_deconv_voxels ~~~~~~~~~~~~~~~~~ .. autofunction:: dsi_deconv_voxels dsi_voxels ~~~~~~~~~~ .. autofunction:: dsi_voxels fetch_bundle_atlas_hcp842 ~~~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_bundle_atlas_hcp842 fetch_bundle_fa_hcp ~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_bundle_fa_hcp fetch_bundles_2_subjects ~~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_bundles_2_subjects fetch_cenir_multib ~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_cenir_multib fetch_cfin_multib ~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_cfin_multib fetch_gold_standard_io ~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_gold_standard_io fetch_isbi2013_2shell ~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_isbi2013_2shell fetch_ivim ~~~~~~~~~~ .. autofunction:: fetch_ivim fetch_mni_template ~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_mni_template fetch_scil_b0 ~~~~~~~~~~~~~ .. autofunction:: fetch_scil_b0 fetch_sherbrooke_3shell ~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_sherbrooke_3shell fetch_stanford_hardi ~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_stanford_hardi fetch_stanford_labels ~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_stanford_labels fetch_stanford_pve_maps ~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_stanford_pve_maps fetch_stanford_t1 ~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_stanford_t1 fetch_syn_data ~~~~~~~~~~~~~~ .. autofunction:: fetch_syn_data fetch_taiwan_ntu_dsi ~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_taiwan_ntu_dsi fetch_target_tractogram_hcp ~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_target_tractogram_hcp fetch_tissue_data ~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_tissue_data get_3shell_gtab ~~~~~~~~~~~~~~~ .. autofunction:: get_3shell_gtab get_bundle_atlas_hcp842 ~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: get_bundle_atlas_hcp842 get_cmap ~~~~~~~~ .. autofunction:: get_cmap get_fnames ~~~~~~~~~~ .. autofunction:: get_fnames get_gtab_taiwan_dsi ~~~~~~~~~~~~~~~~~~~ .. autofunction:: get_gtab_taiwan_dsi get_isbi2013_2shell_gtab ~~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: get_isbi2013_2shell_gtab get_sim_voxels ~~~~~~~~~~~~~~ .. autofunction:: get_sim_voxels get_skeleton ~~~~~~~~~~~~ .. autofunction:: get_skeleton get_sphere ~~~~~~~~~~ .. autofunction:: get_sphere get_target_tractogram_hcp ~~~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: get_target_tractogram_hcp gradient_table ~~~~~~~~~~~~~~ .. autofunction:: gradient_table load ~~~~ .. autofunction:: load loads_compat ~~~~~~~~~~~~ .. autofunction:: loads_compat matlab_life_results ~~~~~~~~~~~~~~~~~~~ .. autofunction:: matlab_life_results mrtrix_spherical_functions ~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: mrtrix_spherical_functions pjoin ~~~~~ .. autofunction:: pjoin read_bundles_2_subjects ~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: read_bundles_2_subjects read_cenir_multib ~~~~~~~~~~~~~~~~~ .. autofunction:: read_cenir_multib read_cfin_dwi ~~~~~~~~~~~~~ .. autofunction:: read_cfin_dwi read_cfin_t1 ~~~~~~~~~~~~ .. autofunction:: read_cfin_t1 read_isbi2013_2shell ~~~~~~~~~~~~~~~~~~~~ .. autofunction:: read_isbi2013_2shell read_ivim ~~~~~~~~~ .. autofunction:: read_ivim read_mni_template ~~~~~~~~~~~~~~~~~ .. autofunction:: read_mni_template read_scil_b0 ~~~~~~~~~~~~ .. autofunction:: read_scil_b0 read_sherbrooke_3shell ~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: read_sherbrooke_3shell read_stanford_hardi ~~~~~~~~~~~~~~~~~~~ .. autofunction:: read_stanford_hardi read_stanford_labels ~~~~~~~~~~~~~~~~~~~~ .. autofunction:: read_stanford_labels read_stanford_pve_maps ~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: read_stanford_pve_maps read_stanford_t1 ~~~~~~~~~~~~~~~~ .. autofunction:: read_stanford_t1 read_syn_data ~~~~~~~~~~~~~ .. autofunction:: read_syn_data read_taiwan_ntu_dsi ~~~~~~~~~~~~~~~~~~~ .. autofunction:: read_taiwan_ntu_dsi read_tissue_data ~~~~~~~~~~~~~~~~ .. autofunction:: read_tissue_data relist_streamlines ~~~~~~~~~~~~~~~~~~ .. autofunction:: relist_streamlines sticks_and_ball ~~~~~~~~~~~~~~~ .. autofunction:: sticks_and_ball two_cingulum_bundles ~~~~~~~~~~~~~~~~~~~~ .. autofunction:: two_cingulum_bundles .. currentmodule:: dipy.data.fetcher :class:`FetcherError` ~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: FetcherError :members: :undoc-members: :show-inheritance: .. automethod:: __init__ check_md5 ~~~~~~~~~ .. autofunction:: check_md5 copyfileobj ~~~~~~~~~~~ .. autofunction:: copyfileobj copyfileobj_withprogress ~~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: copyfileobj_withprogress fetch_bundle_atlas_hcp842 ~~~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_bundle_atlas_hcp842 fetch_bundle_fa_hcp ~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_bundle_fa_hcp fetch_bundles_2_subjects ~~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_bundles_2_subjects fetch_cenir_multib ~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_cenir_multib fetch_cfin_multib ~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_cfin_multib fetch_data ~~~~~~~~~~ .. autofunction:: fetch_data fetch_file_formats ~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_file_formats fetch_gold_standard_io ~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_gold_standard_io fetch_isbi2013_2shell ~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_isbi2013_2shell fetch_ivim ~~~~~~~~~~ .. autofunction:: fetch_ivim fetch_mni_template ~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_mni_template fetch_qtdMRI_test_retest_2subjects ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_qtdMRI_test_retest_2subjects fetch_scil_b0 ~~~~~~~~~~~~~ .. autofunction:: fetch_scil_b0 fetch_sherbrooke_3shell ~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_sherbrooke_3shell fetch_stanford_hardi ~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_stanford_hardi fetch_stanford_labels ~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_stanford_labels fetch_stanford_pve_maps ~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_stanford_pve_maps fetch_stanford_t1 ~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_stanford_t1 fetch_syn_data ~~~~~~~~~~~~~~ .. autofunction:: fetch_syn_data fetch_taiwan_ntu_dsi ~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_taiwan_ntu_dsi fetch_target_tractogram_hcp ~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_target_tractogram_hcp fetch_tissue_data ~~~~~~~~~~~~~~~~~ .. autofunction:: fetch_tissue_data get_bundle_atlas_hcp842 ~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: get_bundle_atlas_hcp842 get_file_formats ~~~~~~~~~~~~~~~~ .. autofunction:: get_file_formats get_target_tractogram_hcp ~~~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: get_target_tractogram_hcp get_two_hcp842_bundles ~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: get_two_hcp842_bundles gradient_table ~~~~~~~~~~~~~~ .. autofunction:: gradient_table gradient_table_from_gradient_strength_bvecs ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: gradient_table_from_gradient_strength_bvecs md5 ~~~ .. autofunction:: md5 pjoin ~~~~~ .. autofunction:: pjoin read_bundles_2_subjects ~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: read_bundles_2_subjects read_bvals_bvecs ~~~~~~~~~~~~~~~~ .. autofunction:: read_bvals_bvecs read_cenir_multib ~~~~~~~~~~~~~~~~~ .. autofunction:: read_cenir_multib read_cfin_dwi ~~~~~~~~~~~~~ .. autofunction:: read_cfin_dwi read_cfin_t1 ~~~~~~~~~~~~ .. autofunction:: read_cfin_t1 read_isbi2013_2shell ~~~~~~~~~~~~~~~~~~~~ .. autofunction:: read_isbi2013_2shell read_ivim ~~~~~~~~~ .. autofunction:: read_ivim read_mni_template ~~~~~~~~~~~~~~~~~ .. autofunction:: read_mni_template read_qtdMRI_test_retest_2subjects ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: read_qtdMRI_test_retest_2subjects read_scil_b0 ~~~~~~~~~~~~ .. autofunction:: read_scil_b0 read_sherbrooke_3shell ~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: read_sherbrooke_3shell read_siemens_scil_b0 ~~~~~~~~~~~~~~~~~~~~ .. autofunction:: read_siemens_scil_b0 read_stanford_hardi ~~~~~~~~~~~~~~~~~~~ .. autofunction:: read_stanford_hardi read_stanford_labels ~~~~~~~~~~~~~~~~~~~~ .. autofunction:: read_stanford_labels read_stanford_pve_maps ~~~~~~~~~~~~~~~~~~~~~~ .. autofunction:: read_stanford_pve_maps read_stanford_t1 ~~~~~~~~~~~~~~~~ .. autofunction:: read_stanford_t1 read_syn_data ~~~~~~~~~~~~~ .. autofunction:: read_syn_data read_taiwan_ntu_dsi ~~~~~~~~~~~~~~~~~~~ .. autofunction:: read_taiwan_ntu_dsi read_tissue_data ~~~~~~~~~~~~~~~~ .. autofunction:: read_tissue_data update_progressbar ~~~~~~~~~~~~~~~~~~ .. autofunction:: update_progressbar urlopen ~~~~~~~ .. autofunction:: urlopen