dipy_convert_tractogram#

Synopsis#

Converts tractogram between different formats.

Usage#

dipy_convert_tractogram [OPTIONS] input_files

Input Parameters#

  • input_files

    Any number of tractogram files

General Options#

  • --reference

    Reference anatomy for tck/vtk/fib/dpy file. support (.nii or .nii.gz).

  • --pos_dtype

    Data type of the tractogram points, used for vtk files.

  • --offsets_dtype

    Data type of the tractogram offsets, used for vtk files.

Output Options#

  • --out_dir

    Output directory. (default current directory)

  • --out_tractogram

    Name of the resulting tractogram

References#

Garyfallidis, E., M. Brett, B. Amirbekian, A. Rokem, S. Van Der Walt, M. Descoteaux, and I. Nimmo-Smith. Dipy, a library for the analysis of diffusion MRI data. Frontiers in Neuroinformatics, 1-18, 2014.

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