dipy_info#

Synopsis#

Provides useful information about different files used in medical imaging. Any number of input files can be provided. The program identifies the type of file by its extension.

Usage#

dipy_info [OPTIONS] input_files

Input Parameters#

  • input_files

    Any number of Nifti1, bvals or bvecs files.

General Options#

  • --b0_threshold

    Threshold used to find b0 volumes.

  • --bvecs_tol

    Threshold used to check that norm(bvec) = 1 +/- bvecs_tol b-vectors are unit vectors.

  • --bshell_thr

    Threshold for distinguishing b-values in different shells.

  • --reference

    Reference anatomy for tck/vtk/fib/dpy file. support (.nii or .nii.gz).

References#

Garyfallidis, E., M. Brett, B. Amirbekian, A. Rokem, S. Van Der Walt, M. Descoteaux, and I. Nimmo-Smith. Dipy, a library for the analysis of diffusion MRI data. Frontiers in Neuroinformatics, 1-18, 2014.

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