dipy_sh_convert_mrtrix#

Synopsis#

Converts SH basis representation between DIPY and MRtrix3 formats. Because this conversion is equal to its own inverse, it can be used to convert in either direction: DIPY to MRtrix3 or vice versa.

Usage#

dipy_sh_convert_mrtrix [OPTIONS] input_files

Input Parameters#

  • input_files

    Path to the input files. This path may contain wildcards to process multiple inputs at once.

Output Options#

  • --out_dir

    Where the resulting file will be saved. (default ‘’)

  • --out_file

    Name of the result file to be saved. (default ‘sh_convert_dipy_mrtrix_out.nii.gz’)

References#

Garyfallidis, E., M. Brett, B. Amirbekian, A. Rokem, S. Van Der Walt, M. Descoteaux, and I. Nimmo-Smith. Dipy, a library for the analysis of diffusion MRI data. Frontiers in Neuroinformatics, 1-18, 2014.

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