dipy_sh_convert_mrtrix

Usage

dipy_sh_convert_mrtrix [-h] [–out_dir str] [–out_file str] input_files

Converts SH basis representation between DIPY and MRtrix3 formats. Because this conversion is equal to its own inverse, it can be used to convert in either direction: DIPY to MRtrix3 or vice versa.

Positional Arguments

input_files Path to the input files. This path may contain wildcards to process multiple inputs at once.

options:

-h, --help

show this help message and exit

Output Arguments(Optional)

--out_dir str

Where the resulting file will be saved. (default ‘’)

--out_file str

Name of the result file to be saved. (default ‘sh_convert_dipy_mrtrix_out.nii.gz’)

References

Garyfallidis, E., M. Brett, B. Amirbekian, A. Rokem, S. Van Der Walt, M. Descoteaux, and I. Nimmo-Smith. Dipy, a library for the analysis of diffusion MRI data. Frontiers in Neuroinformatics, 1-18, 2014.