Command Line Utilities Reference

• dipy_align_affine
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_align_syn
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_apply_transform
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_buan_lmm
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_buan_shapes
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_buan_profiles
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_bundlewarp
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_correct_motion
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_concatenate_tractograms
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_convert_tractogram
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_convert_tensors
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_denoise_nlmeans
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_denoise_lpca
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_denoise_mppca
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_denoise_patch2self
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_evac_plus
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_fetch
  • Synopsis
  • Usage
  • Input Parameters
  • Output Options
  • References
• dipy_fit_csa
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_fit_csd
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_fit_dki
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_fit_dti
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_fit_dsi
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_fit_ivim
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_fit_mapmri
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_gibbs_ringing
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_horizon
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_info
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • References
• dipy_labelsbundles
  • Synopsis
  • Usage
  • Input Parameters
  • Output Options
  • References
• dipy_mask
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_median_otsu
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_nifti2pam
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_pam2nifti
  • Synopsis
  • Usage
  • Input Parameters
  • Output Options
  • References
• dipy_recobundles
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_reslice
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_sh_convert_mrtrix
  • Synopsis
  • Usage
  • Input Parameters
  • Output Options
  • References
• dipy_slr
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_snr_in_cc
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_split
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_tensor2pam
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_track
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References
• dipy_track_pft
  • Synopsis
  • Usage
  • Input Parameters
  • General Options
  • Output Options
  • References